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1

Wash-free and selective imaging of epithelial cell adhesion molecule (EpCAM) expressing cells with fluorogenic peptide ligands

K.C., Tara Bahadur, Suga, Kanako, Isoshima, Takashi, Aigaki, Toshiro, Ito, Yoshihiro, Shiba, Kiyotaka, Uzawa, Takanori

Journal:

Biochemical and Biophysical Research Communications

Year:

2018

Language:

english

File:

PDF, 1.08 MB

english, 2018

2

Prevention of biofilm formation on titanium surfaces modified with conjugated molecules comprised of antimicrobial and titanium-binding peptides

Yoshinari, Masao, Kato, Tetsuo, Matsuzaka, Kenichi, Hayakawa, Tohru, Shiba, Kiyotaka

Journal:

Year:

2010

Language:

english

File:

PDF, 529 KB

english, 2010

3

Utilization of the Pleiotropy of a Peptidic Aptamer To Fabricate Heterogeneous Nanodot-Containing Multilayer Nanostructures

Sano, Ken-Ichi, Sasaki, Hiroyuki, Shiba, Kiyotaka

Journal:

Journal of the American Chemical Society

Year:

2006

Language:

english

File:

PDF, 383 KB

english, 2006

4

Designer Ribozymes: Programming the tRNA Specificity into Flexizyme

Ramaswamy, Krishna, Saito, Hirohide, Murakami, Hiroshi, Shiba, Kiyotaka, Suga, Hiroaki

Journal:

Journal of the American Chemical Society

Year:

2004

Language:

english

File:

PDF, 105 KB

english, 2004

5

Exploitation of peptide motif sequences and their use in nanobiotechnology

Journal:

Current Opinion in Biotechnology

Year:

2010

Language:

english

File:

PDF, 744 KB

english, 2010

6

A Hexapeptide Motif that Electrostatically Binds to the Surface of Titanium

Sano, Ken-Ichi, Shiba, Kiyotaka

Journal:

Journal of the American Chemical Society

Year:

2003

Language:

english

File:

PDF, 70 KB

english, 2003

7

In Aqua Structuralization of a Three-Dimensional Configuration Using Biomolecules

Sano, Ken-Ichi, Yoshii, Shigeo, Yamashita, Ichiro, Shiba, Kiyotaka

Journal:

Year:

2007

Language:

english

File:

PDF, 161 KB

english, 2007

8

Affinity Selection of Peptide Phage Libraries against Single-Wall Carbon Nanohorns Identifies a Peptide Aptamer with Conformational Variability

Kase, Daisuke, Kulp, John L., Yudasaka, Masako, Evans, John Spencer, Iijima, Sumio, Shiba, Kiyotaka

Journal:

Year:

2004

Language:

english

File:

PDF, 84 KB

english, 2004

9

Carbon nanohorns accelerate bone regeneration in rat calvarial bone defect

Kasai, Takao, Matsumura, Sachiko, Iizuka, Tadashi, Shiba, Kiyotaka, Kanamori, Takeshi, Yudasaka, Masako, Iijima, Sumio, Yokoyama, Atsuro

Journal:

Year:

2011

Language:

english

File:

PDF, 2.14 MB

english, 2011

10

Carbon Nanohorns as Anticancer Drug Carriers

Ajima, Kumiko, Yudasaka, Masako, Murakami, Tatsuya, Maigné, Alan, Shiba, Kiyotaka, Iijima, Sumio

Journal:

Molecular Pharmaceutics

Year:

2005

Language:

english

File:

PDF, 501 KB

english, 2005

11

Construction and Characterization of Chimeric Proteins Composed of Type-1 and Type-2 Periplasmic Binding Proteins MglB and ArgT

KASHIWAGI, Kenji, FUKAMI-KOBAYASHI, Kaoru, SHIBA, Kiyotaka, NISHIKAWA, Ken

Journal:

Bioscience Biotechnology and Biochemistry

Year:

2004

Language:

english

File:

PDF, 250 KB

english, 2004

12

In Aqua Manufacturing of a Three-Dimensional Nanostructure Using a Peptide Aptamer

Sano, Ken-Ichi, Shiba, Kiyotaka

Journal:

Year:

2008

Language:

english

File:

PDF, 723 KB

english, 2008

13

Alterations of repeated sequences in 5′ upstream and coding regions in colorectal tumors from patients with hereditary nonpolyposis colorectal cancer and Turcot syndrome

Miyaki, Michiko, Iijima, Takeru, Shiba, Kiyotaka, Aki, Toshihiko, Kita, Yumi, Yasuno, Masamichi, Mori, Takeo, Kuroki, Toshio, Iwama, Takeo

Journal:

Year:

2001

Language:

english

File:

PDF, 143 KB

english, 2001

14

On the Role of Periodism in the Origin of Proteins

Kiyotaka Shiba, Yuki Takahashi, Tetsuo Noda

Journal:

Journal of Molecular Biology

Year:

2002

Language:

english

File:

PDF, 400 KB

english, 2002

15

Creation of novel signalling modulators from existing cytokine using scanning motif-programming

Murakami, Tatsuya, Kashiwagi, Kenji, Shiba, Kiyotaka

Journal:

Chemical Communications

Year:

2011

Language:

english

File:

PDF, 1.88 MB

english, 2011

16

Operational RNA Code for Amino Acids: Species-Specific Aminoacylation of Minihelices Switched by a Single Nucleotide

Deborah Hipps, Kiyotaka Shiba, Barry Henderson and Paul Schimmel

Journal:

Proceedings of the National Academy of Sciences

Year:

1995

Language:

english

File:

PDF, 586 KB

english, 1995

17

Artificial Proteins that Interface between Biological and Inorganic Materials

Shiba, Kiyotaka

Journal:

Journal of Photopolymer Science and Technology

Year:

2004

File:

PDF, 167 KB

2004

18

10.2320/materia.44.799

Sano, Kenichi, Shiba, Kiyotaka

Journal:

Year:

2005

File:

PDF, 3.73 MB

2005

19

Host Cell Prediction of Exosomes Using Morphological Features on Solid Surfaces Analyzed by Machine Learning

Ito, Kazuki, Ogawa, Yuta, Yokota, Keiji, Matsumura, Sachiko, Minamisawa, Tamiko, Suga, Kanako, Shiba, Kiyotaka, Kimura, Yasuo, Hirano-Iwata, Ayumi, Takamura, Yuzuru, Ogino, Toshio

Journal:

Journal of Physical Chemistry B

Year:

2018

Language:

english

File:

PDF, 3.04 MB

english, 2018

20

Bridging Adhesion of a Protein onto an Inorganic Surface Using Self-Assembled Dual-Functionalized Spheres

Sato, Sota, Ikemi, Masatoshi, Kikuchi, Takashi, Matsumura, Sachiko, Shiba, Kiyotaka, Fujita, Makoto

Journal:

Journal of the American Chemical Society

Year:

2015

Language:

english

File:

PDF, 8.91 MB

english, 2015

21

Combinatorial Contextualization of Peptidic Epitopes for Enhanced Cellular Immunity

Ito, Masaki, Hayashi, Kazumi, Adachi, Eru, Minamisawa, Tamiko, Homma, Sadamu, Koido, Shigeo, Shiba, Kiyotaka, Chung, Yeonseok

Journal:

Year:

2014

Language:

english

File:

PDF, 2.12 MB

english, 2014

22

Adhesion of Pancreatic Cancer Cells in a Liver-Microvasculature Mimicking Coculture Correlates with Their Propensity to Form Liver-Specific Metastasis In Vivo

Chowdhury, Mohammad Mahfuz, Danoy, Mathieu, Rahman, Farhana, Shinohara, Marie, Kaneda, Shohei, Shiba, Kiyotaka, Fujita, Naoya, Fujii, Teruo, Sakai, Yasuyuki

Journal:

BioMed Research International

Year:

2014

Language:

english

File:

PDF, 5.28 MB

english, 2014

23

Maintaining genetic code through adaptations of tRNA synthetases to taxonomic domains

Kiyotaka Shiba, Hiromi Motegi, Paul Schmimmel

Journal:

Trends in Biochemical Sciences

Year:

1997

Language:

english

File:

PDF, 916 KB

english, 1997

24

A temperature-sensitive mutant of E. coli exhibiting slow processing of exported proteins

Ito, Koreaki, Wittekind, Michael, Nomura, Masayasu, Shiba, Kiyotaka, Yura, Takashi, Miura, Akiko, Nashimoto, Hiroko

Journal:

Year:

1983

Language:

english

File:

PDF, 2.13 MB

english, 1983

25

Dominant Negative Inhibition by Fragments of a Monomeric Enzyme

John-Edward A. Michaels, Paul Schimmel, Kiyotaka Shiba and W. Todd Miller

Journal:

Proceedings of the National Academy of Sciences

Year:

1996

Language:

english

File:

PDF, 1.02 MB

english, 1996

26

Genetic Dissection of Protein-Protein Interactions in Multi-tRNA Synthetase Complex

Seung Bae Rho, Min Jung Kim, Jong Sang Lee, Wongi Seol, Hiromi Motegi, Sunghoon Kim and Kiyotaka Shiba

Journal:

Proceedings of the National Academy of Sciences

Year:

1999

Language:

english

File:

PDF, 1.56 MB

english, 1999

27

Motif-Programmed Artificial Extracellular Matrix

Kokubun, Katsutoshi, Kashiwagi, Kenji, Yoshinari, Masao, Inoue, Takashi, Shiba, Kiyotaka

Journal:

Biomacromolecules

Year:

2008

Language:

english

File:

PDF, 5.47 MB

english, 2008

28

Adsorption Properties of a Gold-Binding Peptide Assessed by its Attachment to a Recombinant Apoferritin Molecule

Ishikawa, Kazutaka, Yamada, Kiyohito, Kumagai, Shinya, Sano, Ken-Ichi, Shiba, Kiyotaka, Yamashita, Ichiro, Kobayashi, Mime

Journal:

Applied Physics Express

Year:

2008

Language:

english

File:

PDF, 456 KB

english, 2008

29

Insertional disruption of thenusB(ssyB) gene leads to cold-sensitive growth ofEscherichia coliand suppression of thesecY24mutation

Tetsuya Taura, Chiharu Ueguchi, Kiyotaka Shiba, Koreaki Ito

Journal:

Molecular Genetics and Genomics

Year:

1992

Language:

english

File:

PDF, 520 KB

english, 1992

30

A Tumor-Environment-Responsive Nanocarrier That Evolves Its Surface Properties upon Sensing Matrix Metalloproteinase-2 and Initiates Agglomeration to Enhance T 2 Relaxivity for Magnetic Resonance Imaging

Matsumura, Sachiko, Aoki, Ichio, Saga, Tsuneo, Shiba, Kiyotaka

Journal:

Molecular Pharmaceutics

Year:

2011

Language:

english

File:

PDF, 3.60 MB

english, 2011

31

Directional BMP-2 for functionalization of titanium surfaces

Kenji Kashiwagi, Toru Tsuji, Kiyotaka Shiba

Journal:

Year:

2009

Language:

english

File:

PDF, 731 KB

english, 2009

32

Distinct macroscopic structures developed from solutions of chemical compounds and periodic proteins

Shiba, Kiyotaka, Honma, Takako, Minamisawa, Tamiko, Nishiguchi, Keiichi, Noda, Tetsuo

Journal:

Year:

2003

Language:

english

File:

PDF, 1.06 MB

english, 2003

33

Synthesis of Functional Signaling Domains by Combinatorial Polymerization of Phosphorylation Motifs

Patwardhan, Parag, Shiba, Kiyotaka, Gordon, Chris, Craddock, Barbara P., Tamiko, Minamisawa, Miller, W. Todd

Journal:

ACS Chemical Biology

Year:

2009

Language:

english

File:

PDF, 4.57 MB

english, 2009

34

Autonomous folding of a C-terminal inhibitory fragment of Escherichia coli isoleucine-tRNA synthetase

John-Edward A. Michaels, Kiyotaka Shiba, W.Todd Miller

Journal:

Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology

Year:

1999

Language:

english

File:

PDF, 334 KB

english, 1999

35

Structural Properties of an Artificial Protein That Regulates the Nucleation of Inorganic and Organic Crystals

Kulp, John L., Minamisawa, Tamiko, Shiba, Kiyotaka, Tejani, Margaret, Evans, John Spencer

Journal:

Year:

2007

Language:

english

File:

PDF, 284 KB

english, 2007

36

Specificity and Biomineralization Activities of Ti-Binding Peptide-1 (TBP-1)

Sano, Ken-Ichi, Sasaki, Hiroyuki, Shiba, Kiyotaka

Journal:

Year:

2005

Language:

english

File:

PDF, 433 KB

english, 2005

37

Physicochemical properties of artificial proteins that accelerate nucleation of crystalline calcium phosphate

Toru Tsuji, Kazuo Onuma, Akira Yamamoto, Mayumi Iijima, Kiyotaka Shiba

Journal:

Journal of Crystal Growth

Year:

2011

Language:

english

File:

PDF, 682 KB

english, 2011

38

Critical Amino Acid Residues for the Specific Binding of the Ti-Recognizing Recombinant Ferritin with Oxide Surfaces of Titanium and Silicon

Hayashi, Tomohiro, Sano, Ken-Ichi, Shiba, Kiyotaka, Iwahori, Kenji, Yamashita, Ichiro, Hara, Masahiko

Journal:

Year:

2009

Language:

english

File:

PDF, 3.09 MB

english, 2009

39

Prevention of Carbon Nanohorn Agglomeration Using a Conjugate Composed of Comb-Shaped Polyethylene Glycol and a Peptide Aptamer

Matsumura, Sachiko, Sato, Shigeo, Yudasaka, Masako, Tomida, Akihiro, Tsuruo, Takashi, Iijima, Sumio, Shiba, Kiyotaka

Journal:

Molecular Pharmaceutics

Year:

2009

Language:

english

File:

PDF, 843 KB

english, 2009

40

An artificial fusion protein between bone morphogenetic protein 2 and titanium-binding peptide is functional in vivo

Yuasa, Kazuaki, Kokubu, Eitoyo, Kokubun, Katsutoshi, Matsuzaka, Kenichi, Shiba, Kiyotaka, Kashiwagi, Kenji, Inoue, Takashi

Journal:

Journal of Biomedical Materials Research Part A

Year:

2014

Language:

english

File:

PDF, 526 KB

english, 2014

41

Stepwise accumulation of layers of aptamer-ornamented ferritins using biomimetic layer-by-layer

Sano, Ken-Ichi, Shiba, Kiyotaka

Journal:

Journal of Materials Research

Year:

2008

Language:

english

File:

PDF, 268 KB

english, 2008

42

RNA Binding Determinant in Some Class tRNA Synthetases Identified by Alignment-Guided Mutagenesis

Alyssa Shepard, Kiyotaka Shiba and Paul Schimmel

Journal:

Proceedings of the National Academy of Sciences

Year:

1992

Language:

english

File:

PDF, 1.20 MB

english, 1992

43

Urbanization, Life Style Changes and the Incidence/In-Hospital Mortality of Acute Myocardial Infarction in Japan

Hao, Kiyotaka, Yasuda, Satoshi, Takii, Toru, Ito, Yoshitaka, Takahashi, Jun, Ito, Kenta, Nakayama, Masaharu, Shiba, Nobuyuki, Fukumoto, Yoshihiro, Shimokawa, Hiroaki, on behalf of the MIYAGI-AMI Study

Journal:

Circulation Journal

Year:

2012

Language:

english

File:

PDF, 2.25 MB

english, 2012

44

Wide Cross-Species Aminoacyl-tRNA Synthetase Replacement in vivo: Yeast Cytoplasmic Alanine Enzyme Replaced by Human Polymyositis Serum Antigen

Tracy L. Ripmaster, Kiyotaka Shiba and Paul Schimmel

Journal:

Proceedings of the National Academy of Sciences

Year:

1995

Language:

english

File:

PDF, 1.15 MB

english, 1995

45

Rhodium-catalyzed carbonylation of 2-alkynylbenzylamine: a new route to the synthesis of benzazepinones

Takanori Shiba, Da-Yang Zhou, Kiyotaka Onitsuka, Shigetoshi Takahashi

Journal:

Tetrahedron Letters

Year:

2004

Language:

english

File:

PDF, 262 KB

english, 2004

46

Intron locations and functional deletions in relation to the design and evolution of a subgroup of class I tRNA synthetases

Paul Schimmel, Alyssa Shepard, Kiyotaka Shiba

Journal:

Protein Science

Year:

1992

Language:

english

File:

PDF, 552 KB

english, 1992

47

Drug-Loaded Carbon Nanohorns: Adsorption and Release of Dexamethasone in Vitro

Murakami, Tatsuya, Ajima, Kumiko, Miyawaki, Jin, Yudasaka, Masako, Iijima, Sumio, Shiba, Kiyotaka

Journal:

Molecular Pharmaceutics

Year:

2004

Language:

english

File:

PDF, 180 KB

english, 2004

48

Realizing a Two-Dimensional Ordered Array of Ferritin Molecules Directly on a Solid Surface Utilizing Carbonaceous Material Affinity Peptides

Matsui, Takuro, Matsukawa, Nozomu, Iwahori, Kenji, Sano, Ken-Ichi, Shiba, Kiyotaka, Yamashita, Ichiro

Journal:

Year:

2007

Language:

english

File:

PDF, 353 KB

english, 2007

49

3TA1-02 Direct transformation from amorphous to crystalline calcium phosphate facilitated by motif-programmed artificial proteins(The 47th Annual Meeting of the Biophysical Society of Japan)

Tsuji, Toru, Onuma, Kazuo, Yamamoto, Akira, Iijima, Mayumi, Shiba, Kiyotaka

Journal:

Seibutsu Butsuri

Year:

2009

Language:

english

File:

PDF, 242 KB

english, 2009

50

New Role for Growth/Differentiation Factor 15 in the Survival of Transplanted Brown Adipose Tissues in Cooperation with Interleukin-6

Oka, Masako, Kobayashi, Norihiko, Matsumura, Kazunori, Nishio, Miwako, Nakano, Kenta, Okamura, Tadashi, Okochi, Hitoshi, Minamisawa, Tamiko, Shiba, Kiyotaka, Saeki, Kumiko

Journal:

Year:

2020

File:

PDF, 3.59 MB

2020

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